Top cofit genes for b4058 from Escherichia coli BW25113

b4058 uvrA : excinuclease ABC subunit A (NCBI)

SEED: Excinuclease ABC subunit A; KEGG: excinuclease ABC subunit A



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Rank Hit Name Description Conserved? Cofitness  
1 b0779 uvrB excinuclease ABC subunit B (NCBI) 0.99 0.93
2 b1913 uvrC excinuclease ABC, subunit C; repair of UV damage to DNA (VIMSS) 0.96 0.85
3 b3700 recF recombination protein F (NCBI) 0.97 0.83
4 b0472 recR recombination protein RecR (NCBI) 0.96 0.79
5 b2565 recO DNA repair protein RecO (NCBI) 0.97 0.76
6 b1184 umuC DNA polymerase V subunit UmuC (NCBI) 0.62 0.75
7 b2184 yejH predicted ATP-dependet helicase (NCBI) 0.61 0.73
8 b4389 radA predicted repair protein (NCBI) 0.94 0.71
9 b0060 polB DNA polymerase II (NCBI) 0.85 0.71
10 b3813 uvrD DNA-dependent ATPase I and helicase II (NCBI) 0.96 0.65
11 b2819 recD exonuclease V (RecBCD complex), alpha chain (NCBI) 0.72 0.65
12 b3660 yicL predicted inner membrane protein (NCBI) no 0.65
13 b2616 recN recombination and repair protein (NCBI) 0.92 0.61
14 b0946 ycbW orf, hypothetical protein (VIMSS) 0.66 0.61
15 b1114 mfd transcription-repair coupling factor (NCBI) 0.98 0.56
16 b2011 sbcB exonuclease I (NCBI) 0.54 0.52
17 b0577 ybdG predicted mechanosensitive channel (NCBI) no 0.51
18 b2945 endA DNA-specific endonuclease I (NCBI) 0.63 0.49
19 b1175 minD membrane ATPase of the MinC-MinD-MinE system (NCBI) 0.90 0.49
20 b3651 trmH tRNA (Guanosine-2'-O-)-methyltransferase (NCBI) no 0.48