Fitness Browser

Browse thousands of genome-wide fitness experiments for diverse bacteria from the Deutschbauer lab, the Arkin lab, and collaborators. For more information, see the paper or the help page.

September 10, 2021: We have removed all of the old data for the utilization of sucrose and D-mannitol. There was a problem with our stock solutions of those compounds. The data in the browser now is from fresh stock solutions of sucrose and D-mannitol. We also checked that the data from these experiments is consistent with prior knowledge of the utilization of these compounds. Finally, we checked the gene re-annotations that were related to sucrose or mannitol utilization.

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Examples

Genes Top Phenotypes
Top Cofitness
Compare Genes
Experiments Specific Phenotypes
Compare Experiments
Outliers
Multi-Organism Overview of a Condition
Conserved Phenotypes
Conserved Cofitness
Developed by Morgan Price, Victoria Lo, and Wenjun Shao in the Arkin lab. Please report any bugs to Morgan.